STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_01906Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_000423105_01907
Unannotated protein.
 
     0.950
GCA_000423105_01540
Unannotated protein.
  
 
  0.808
GCA_000423105_01987
Unannotated protein.
    
  0.802
GCA_000423105_02681
Unannotated protein.
 
   
  0.762
GCA_000423105_00167
Unannotated protein.
  
  
 
0.749
GCA_000423105_00146
Unannotated protein.
  
  
 
0.747
GCA_000423105_01275
Unannotated protein.
 
  
  0.745
GCA_000423105_00417
Unannotated protein.
  
  
 
0.742
GCA_000423105_01274
Unannotated protein.
  
  
 
0.741
GCA_000423105_02080
Unannotated protein.
  
  
 
0.741
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.