STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_02248Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_000423105_02247
Unannotated protein.
  
    0.866
GCA_000423105_02232
Unannotated protein.
  
  
 0.782
GCA_000423105_02251
Unannotated protein.
  
    0.756
GCA_000423105_02249
Unannotated protein.
       0.753
GCA_000423105_02250
Unannotated protein.
       0.753
GCA_000423105_00823
Unannotated protein.
  
  
 0.680
GCA_000423105_00824
Unannotated protein.
   
  
 0.657
GCA_000423105_02252
Unannotated protein.
  
  
 0.644
GCA_000423105_00783
Unannotated protein.
 
    0.626
GCA_000423105_02246
Unannotated protein.
  
  
 0.612
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.