STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423105_02652Unannotated protein. (694 aa)    
Predicted Functional Partners:
GCA_000423105_00171
Unannotated protein.
 0.990
GCA_000423105_01321
Unannotated protein.
 0.990
GCA_000423105_02076
Unannotated protein.
 0.978
GCA_000423105_00605
Unannotated protein.
 
 0.976
GCA_000423105_02475
Unannotated protein.
 
 0.974
GCA_000423105_01243
Unannotated protein.
 
 0.969
GCA_000423105_00191
Unannotated protein.
 0.962
GCA_000423105_00467
Unannotated protein.
 
0.959
GCA_000423105_01902
Unannotated protein.
0.953
GCA_000423105_00656
Unannotated protein.
 
0.951
Your Current Organism:
Halalkalibacillus halophilus
NCBI taxonomy Id: 1121936
Other names: H. halophilus DSM 18494, Halalkalibacillus halophilus DSM 18494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.