STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423125_00130Unannotated protein. (526 aa)    
Predicted Functional Partners:
DCP75_15595
Unannotated protein.
 
 
 0.674
GCA_000423125_00131
Unannotated protein.
       0.628
GCA_000423125_03661
Unannotated protein.
 
 
 0.624
DCP75_13350
Unannotated protein.
   
  0.610
DCP75_15305
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.524
GCA_000423125_00132
Unannotated protein.
  
  
 0.481
GCA_000423125_00133
Unannotated protein.
    
  0.454
pheA
Unannotated protein.
   
 
 0.410
GCA_000423125_00129
Unannotated protein.
       0.408
Your Current Organism:
Haliea salexigens
NCBI taxonomy Id: 1121937
Other names: H. salexigens DSM 19537, Haliea salexigens DSM 19537, gamma proteobacterium 3X/A02/235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.