Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP75_05360 | mobA | GCA_000423125_00310 | GCA_000423125_00313 | Unannotated protein. | Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.516 |
DCP75_05360 | trpS | GCA_000423125_00310 | GCA_000423125_00309 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.828 |
DCP75_05360 | tsaB | GCA_000423125_00310 | GCA_000423125_00312 | Unannotated protein. | Unannotated protein. | 0.764 |
DCP75_05360 | uppP | GCA_000423125_00310 | GCA_000423125_00311 | Unannotated protein. | Unannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.758 |
DCP75_05485 | DCP75_08410 | GCA_000423125_02659 | GCA_000423125_03233 | Unannotated protein. | Unannotated protein. | 0.954 |
DCP75_05485 | DCP75_08730 | GCA_000423125_02659 | GCA_000423125_01029 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.605 |
DCP75_05485 | tsaB | GCA_000423125_02659 | GCA_000423125_00312 | Unannotated protein. | Unannotated protein. | 0.980 |
DCP75_08410 | DCP75_05485 | GCA_000423125_03233 | GCA_000423125_02659 | Unannotated protein. | Unannotated protein. | 0.954 |
DCP75_08410 | DCP75_08730 | GCA_000423125_03233 | GCA_000423125_01029 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.583 |
DCP75_08410 | tsaB | GCA_000423125_03233 | GCA_000423125_00312 | Unannotated protein. | Unannotated protein. | 0.989 |
DCP75_08730 | DCP75_05485 | GCA_000423125_01029 | GCA_000423125_02659 | Unannotated protein; Belongs to the SUA5 family. | Unannotated protein. | 0.605 |
DCP75_08730 | DCP75_08410 | GCA_000423125_01029 | GCA_000423125_03233 | Unannotated protein; Belongs to the SUA5 family. | Unannotated protein. | 0.583 |
DCP75_08730 | tsaB | GCA_000423125_01029 | GCA_000423125_00312 | Unannotated protein; Belongs to the SUA5 family. | Unannotated protein. | 0.584 |
DCP75_08985 | tsaB | GCA_000423125_03824 | GCA_000423125_00312 | Unannotated protein. | Unannotated protein. | 0.580 |
birA | ribD | GCA_000423125_03269 | GCA_000423125_03312 | Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.522 |
birA | tsaB | GCA_000423125_03269 | GCA_000423125_00312 | Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Unannotated protein. | 0.955 |
mobA | DCP75_05360 | GCA_000423125_00313 | GCA_000423125_00310 | Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | Unannotated protein. | 0.516 |
mobA | trpS | GCA_000423125_00313 | GCA_000423125_00309 | Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.513 |
mobA | tsaB | GCA_000423125_00313 | GCA_000423125_00312 | Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | Unannotated protein. | 0.599 |
mobA | uppP | GCA_000423125_00313 | GCA_000423125_00311 | Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | Unannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.602 |
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