Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP75_11275 | DCP75_15015 | GCA_000423125_00487 | GCA_000423125_00481 | Unannotated protein. | Unannotated protein. | 0.741 |
DCP75_11275 | bamA | GCA_000423125_00487 | GCA_000423125_00488 | Unannotated protein. | Unannotated protein. | 0.956 |
DCP75_11275 | fabZ | GCA_000423125_00487 | GCA_000423125_00485 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.874 |
DCP75_11275 | lpxA | GCA_000423125_00487 | GCA_000423125_00484 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.836 |
DCP75_11275 | lpxB | GCA_000423125_00487 | GCA_000423125_00483 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.771 |
DCP75_11275 | lpxD | GCA_000423125_00487 | GCA_000423125_00486 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.965 |
DCP75_11275 | rnhB | GCA_000423125_00487 | GCA_000423125_00482 | Unannotated protein. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.772 |
DCP75_15015 | DCP75_11275 | GCA_000423125_00481 | GCA_000423125_00487 | Unannotated protein. | Unannotated protein. | 0.741 |
DCP75_15015 | bamA | GCA_000423125_00481 | GCA_000423125_00488 | Unannotated protein. | Unannotated protein. | 0.706 |
DCP75_15015 | dnaN | GCA_000423125_00481 | GCA_000423125_02189 | Unannotated protein. | Unannotated protein. | 0.976 |
DCP75_15015 | fabZ | GCA_000423125_00481 | GCA_000423125_00485 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.826 |
DCP75_15015 | lpxA | GCA_000423125_00481 | GCA_000423125_00484 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.800 |
DCP75_15015 | lpxB | GCA_000423125_00481 | GCA_000423125_00483 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.825 |
DCP75_15015 | lpxD | GCA_000423125_00481 | GCA_000423125_00486 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.753 |
DCP75_15015 | rnhA | GCA_000423125_00481 | GCA_000423125_01480 | Unannotated protein. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.445 |
DCP75_15015 | rnhB | GCA_000423125_00481 | GCA_000423125_00482 | Unannotated protein. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.837 |
bamA | DCP75_11275 | GCA_000423125_00488 | GCA_000423125_00487 | Unannotated protein. | Unannotated protein. | 0.956 |
bamA | DCP75_15015 | GCA_000423125_00488 | GCA_000423125_00481 | Unannotated protein. | Unannotated protein. | 0.706 |
bamA | fabZ | GCA_000423125_00488 | GCA_000423125_00485 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.852 |
bamA | lpxA | GCA_000423125_00488 | GCA_000423125_00484 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.899 |
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