Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCP75_02120 | DCP75_02130 | GCA_000423125_01840 | GCA_000423125_01839 | Unannotated protein. | Unannotated protein. | 0.999 |
DCP75_02120 | DCP75_07725 | GCA_000423125_01840 | GCA_000423125_02119 | Unannotated protein. | Unannotated protein. | 0.830 |
DCP75_02120 | DCP75_07785 | GCA_000423125_01840 | GCA_000423125_02128 | Unannotated protein. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.958 |
DCP75_02120 | DCP75_10720 | GCA_000423125_01840 | GCA_000423125_00804 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.865 |
DCP75_02120 | DCP75_11150 | GCA_000423125_01840 | GCA_000423125_02954 | Unannotated protein. | Unannotated protein. | 0.885 |
DCP75_02120 | DCP75_12240 | GCA_000423125_01840 | GCA_000423125_01444 | Unannotated protein. | Unannotated protein. | 0.914 |
DCP75_02120 | DCP75_15980 | GCA_000423125_01840 | GCA_000423125_01842 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.996 |
DCP75_02120 | leuB | GCA_000423125_01840 | GCA_000423125_01446 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.991 |
DCP75_02120 | leuD | GCA_000423125_01840 | GCA_000423125_01445 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.935 |
DCP75_02130 | DCP75_02120 | GCA_000423125_01839 | GCA_000423125_01840 | Unannotated protein. | Unannotated protein. | 0.999 |
DCP75_02130 | DCP75_07725 | GCA_000423125_01839 | GCA_000423125_02119 | Unannotated protein. | Unannotated protein. | 0.909 |
DCP75_02130 | DCP75_07785 | GCA_000423125_01839 | GCA_000423125_02128 | Unannotated protein. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.920 |
DCP75_02130 | DCP75_10720 | GCA_000423125_01839 | GCA_000423125_00804 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.957 |
DCP75_02130 | DCP75_11150 | GCA_000423125_01839 | GCA_000423125_02954 | Unannotated protein. | Unannotated protein. | 0.900 |
DCP75_02130 | DCP75_12240 | GCA_000423125_01839 | GCA_000423125_01444 | Unannotated protein. | Unannotated protein. | 0.887 |
DCP75_02130 | DCP75_15980 | GCA_000423125_01839 | GCA_000423125_01842 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.991 |
DCP75_02130 | leuB | GCA_000423125_01839 | GCA_000423125_01446 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.977 |
DCP75_02130 | leuD | GCA_000423125_01839 | GCA_000423125_01445 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.893 |
DCP75_02130 | pyk | GCA_000423125_01839 | GCA_000423125_02504 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.896 |
DCP75_07725 | DCP75_02120 | GCA_000423125_02119 | GCA_000423125_01840 | Unannotated protein. | Unannotated protein. | 0.830 |
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