STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423125_02878Unannotated protein. (704 aa)    
Predicted Functional Partners:
DCP75_14475
Unannotated protein.
 
 
 0.955
GCA_000423125_02877
Unannotated protein.
 
  
 0.853
DCP75_06270
Unannotated protein.
  
  
 0.606
DCP75_16985
Unannotated protein.
 
  
 0.556
DCP75_14495
Unannotated protein.
  
  
 0.551
tolA
Unannotated protein.
  
 
 0.525
DCP75_13005
Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.525
DCP75_14750
Unannotated protein.
  
 
 0.523
GCA_000423125_02879
Unannotated protein.
       0.477
GCA_000423125_02880
Unannotated protein.
       0.477
Your Current Organism:
Haliea salexigens
NCBI taxonomy Id: 1121937
Other names: H. salexigens DSM 19537, Haliea salexigens DSM 19537, gamma proteobacterium 3X/A02/235
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