STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldUnannotated protein; Belongs to the AlaDH/PNT family. (374 aa)    
Predicted Functional Partners:
alr
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.981
DCP75_11235
Unannotated protein.
   
  0.950
DCP75_09260
Unannotated protein.
     
 0.879
DCP75_13505
Unannotated protein.
     
 0.872
GCA_000423125_01832
Unannotated protein.
  
 
  0.738
DCP75_11250
Unannotated protein.
 
  
 
0.530
putA
Unannotated protein.
  
  
 0.528
DCP75_18535
Unannotated protein.
     
 0.523
DCP75_18530
Unannotated protein.
     
 0.523
DCP75_18525
Unannotated protein.
       0.522
Your Current Organism:
Haliea salexigens
NCBI taxonomy Id: 1121937
Other names: H. salexigens DSM 19537, Haliea salexigens DSM 19537, gamma proteobacterium 3X/A02/235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.