STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423125_03549Unannotated protein. (338 aa)    
Predicted Functional Partners:
DCP75_04760
Unannotated protein.
  
     0.762
DCP75_01020
Unannotated protein.
    
  0.628
DCP75_15960
Unannotated protein.
     
 0.485
DCP75_00800
Unannotated protein.
     
 0.485
GCA_000423125_03550
Unannotated protein.
     
 0.466
GCA_000423125_03548
Unannotated protein.
       0.449
DCP75_02505
Unannotated protein.
  
     0.426
GCA_000423125_00446
Unannotated protein.
  
     0.411
GCA_000423125_03551
Unannotated protein.
       0.405
Your Current Organism:
Haliea salexigens
NCBI taxonomy Id: 1121937
Other names: H. salexigens DSM 19537, Haliea salexigens DSM 19537, gamma proteobacterium 3X/A02/235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.