STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425705_00687Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_000425705_00688
Unannotated protein.
  
    0.864
GCA_000425705_03029
Unannotated protein.
 
   
 0.723
GCA_000425705_03715
Unannotated protein.
  
  
 0.632
GCA_000425705_01940
Unannotated protein.
     
 0.572
GCA_000425705_02113
Unannotated protein.
 
   
 0.565
GCA_000425705_00686
Unannotated protein.
       0.545
GCA_000425705_00689
Unannotated protein.
  
    0.526
GCA_000425705_01990
Unannotated protein.
 
   
 0.515
GCA_000425705_00809
Unannotated protein.
 
  
 0.495
GCA_000425705_01834
Unannotated protein.
 
    0.493
Your Current Organism:
Halobacillus kuroshimensis
NCBI taxonomy Id: 1121938
Other names: H. kuroshimensis DSM 18393, Halobacillus kuroshimensis DSM 18393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.