STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPC02230.1Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (378 aa)    
Predicted Functional Partners:
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.998
EPC02231.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.988
EPC01017.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cytochrome P450 family.
  
 0.983
EPC02239.1
NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.980
EPC02224.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.
 
 0.979
EPC01914.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.961
EPC01061.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.959
EPC02251.1
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.953
EPC02772.1
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.950
EPC04448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.945
Your Current Organism:
Halomonas anticariensis
NCBI taxonomy Id: 1121939
Other names: H. anticariensis FP35 = DSM 16096, Halomonas anticariensis DSM 16096, Halomonas anticariensis DSM 16096 = FP35, Halomonas anticariensis FP35, Halomonas anticariensis FP35 = DSM 16096
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