STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425725_00878Unannotated protein. (133 aa)    
Predicted Functional Partners:
GCA_000425725_00761
Unannotated protein.
 
 0.987
GCA_000425725_00482
Unannotated protein.
 
 0.986
GCA_000425725_00741
Unannotated protein.
    
 
 0.744
GCA_000425725_00153
Unannotated protein.
 
      0.743
GCA_000425725_00613
Unannotated protein.
  
    0.707
GCA_000425725_00876
Unannotated protein.
       0.631
GCA_000425725_00877
Unannotated protein.
       0.592
GCA_000425725_02366
Unannotated protein.
   
 0.555
GCA_000425725_00875
Unannotated protein.
  
  
 0.526
GCA_000425725_00146
Unannotated protein.
 
      0.512
Your Current Organism:
Halomonas halocynthiae
NCBI taxonomy Id: 1121940
Other names: H. halocynthiae DSM 14573, Halomonas halocynthiae DSM 14573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.