STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE79555.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
SHE79503.1
Malate/L-lactate dehydrogenase.
       0.773
SHE79438.1
Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.682
SHE79474.1
Hypothetical protein.
       0.682
SHE79407.1
Zn-dependent dipeptidase, dipeptidase homolog.
       0.526
SHE79591.1
Signal transduction histidine kinase.
       0.486
SHE79624.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.486
Your Current Organism:
Halomonas ilicicola
NCBI taxonomy Id: 1121942
Other names: H. ilicicola DSM 19980, Halomonas ilicicola DSM 19980
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.