STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF24027.1LemA protein. (203 aa)    
Predicted Functional Partners:
SHF23993.1
Uncharacterized protein.
 
    0.958
SHF23965.1
Putative membrane protein.
 
     0.837
SHF84418.1
Uncharacterized protein.
 
    0.823
SHF84451.1
Putative membrane protein.
 
     0.655
SHF24057.1
Molybdate transport system substrate-binding protein.
       0.523
SHF24090.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.497
modC
Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
       0.497
Your Current Organism:
Halomonas ilicicola
NCBI taxonomy Id: 1121942
Other names: H. ilicicola DSM 19980, Halomonas ilicicola DSM 19980
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