STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9H04_13860Unannotated protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (298 aa)    
Predicted Functional Partners:
panB
Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.956
B9H04_09785
Unannotated protein.
 
  
 0.941
nadE-2
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.599
B9H04_02860
Unannotated protein.
     
 0.587
CoaBC
Unannotated protein.
 
  
 0.568
B9H04_13855
Unannotated protein.
       0.566
B9H04_13850
Unannotated protein.
     
 0.565
deoC
Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
   
 0.456
GCA_000421805_02785
Unannotated protein.
     
 0.450
B9H04_03540
Unannotated protein.
 
   
 0.438
Your Current Organism:
Halorubrum ezzemoulense
NCBI taxonomy Id: 1121945
Other names: H. ezzemoulense DSM 17463, Halorubrum ezzemoulense DSM 17463
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.