STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421805_03390Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000421805_02901
Unannotated protein.
  
     0.629
GCA_000421805_02956
Unannotated protein.
  
     0.580
GCA_000421805_03325
Unannotated protein.
  
     0.565
GCA_000421805_02900
Unannotated protein.
  
     0.564
GCA_000421805_02080
Unannotated protein.
  
     0.537
B9H04_08950
Unannotated protein.
  
     0.516
B9H04_15350
Unannotated protein.
  
     0.512
GCA_000421805_03449
Unannotated protein.
  
     0.512
B9H04_13460
Unannotated protein.
  
     0.443
GCA_000421805_03510
Unannotated protein.
  
     0.415
Your Current Organism:
Halorubrum ezzemoulense
NCBI taxonomy Id: 1121945
Other names: H. ezzemoulense DSM 17463, Halorubrum ezzemoulense DSM 17463
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.