STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428945_07134Unannotated protein. (886 aa)    
Predicted Functional Partners:
GCA_000428945_04194
Unannotated protein.
 
 
 0.862
GCA_000428945_03776
Unannotated protein.
  
 
 
0.849
GCA_000428945_00026
Unannotated protein.
    
  0.811
GCA_000428945_00031
Unannotated protein.
    
 0.806
GCA_000428945_00023
Unannotated protein.
    
  0.785
GCA_000428945_04663
Unannotated protein.
    
 0.778
GCA_000428945_00420
Unannotated protein.
 
  
 0.775
GCA_000428945_03777
Unannotated protein.
  
 
  0.766
GCA_000428945_00024
Unannotated protein.
   
  0.748
GCA_000428945_06499
Unannotated protein.
 
  
  0.741
Your Current Organism:
Hamadaea tsunoensis
NCBI taxonomy Id: 1121946
Other names: H. tsunoensis DSM 44101, Hamadaea tsunoensis DSM 44101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.