STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428945_07211Unannotated protein. (2096 aa)    
Predicted Functional Partners:
GCA_000428945_00025
Unannotated protein.
   
 0.978
GCA_000428945_00023
Unannotated protein.
    
 0.886
GCA_000428945_04663
Unannotated protein.
    
 0.874
GCA_000428945_00031
Unannotated protein.
   
 0.868
GCA_000428945_06672
Unannotated protein.
     
 0.867
GCA_000428945_07210
Unannotated protein.
       0.773
GCA_000428945_00347
Unannotated protein.
  
     0.686
GCA_000428945_01773
Unannotated protein.
    
 0.678
GCA_000428945_02248
Unannotated protein.
    
 0.678
GCA_000428945_05473
Unannotated protein.
    
 0.678
Your Current Organism:
Hamadaea tsunoensis
NCBI taxonomy Id: 1121946
Other names: H. tsunoensis DSM 44101, Hamadaea tsunoensis DSM 44101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.