STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423145_00805Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000423145_00803
Unannotated protein.
 
 
 0.999
GCA_000423145_00804
Unannotated protein.
 
 
0.999
GCA_000423145_00806
Unannotated protein.
 
 
 0.998
GCA_000423145_00802
Unannotated protein.
 
  
 0.967
GCA_000423145_00801
Unannotated protein.
 
   
 0.802
GCA_000423145_00800
Unannotated protein.
     
 0.757
GCA_000423145_00382
Unannotated protein.
  
 
 0.595
GCA_000423145_00799
Unannotated protein.
       0.566
GCA_000423145_01355
Unannotated protein.
    
 0.541
GCA_000423145_01108
Unannotated protein.
     
 0.523
Your Current Organism:
Helcococcus sueciensis
NCBI taxonomy Id: 1121947
Other names: H. sueciensis DSM 17243, Helcococcus sueciensis DSM 17243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.