STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ26204.1Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (588 aa)    
Predicted Functional Partners:
SHJ59841.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.992
SHJ26181.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
 0.980
SHJ22945.1
NADH-quinone oxidoreductase subunit F.
    
 0.960
SHK42232.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
 0.906
SHJ26157.1
Uncharacterized conserved protein, contains tandem ACT domains.
 
    0.894
SHJ58284.1
Ferredoxin hydrogenase.
  
 
 0.883
SHJ26111.1
Uncharacterized conserved protein, contains tandem ACT domains.
 
    0.879
SHJ86751.1
NADH-quinone oxidoreductase subunit G.
    
 0.870
SHJ86725.1
NADPH-dependent glutamate synthase beta chain.
 
 
 0.861
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.840
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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