STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ36486.1Phage terminase-like protein, large subunit, contains N-terminal HTH domain. (547 aa)    
Predicted Functional Partners:
SHJ36415.1
Phage portal protein, HK97 family.
 
   
 0.871
SHJ36344.1
Phage major capsid protein, HK97 family.
 
     0.842
SHJ36383.1
ATP-dependent Clp protease, protease subunit.
 
     0.829
SHJ64748.1
Phage portal protein, HK97 family.
 
   
 0.787
SHK11908.1
Phage portal protein, HK97 family.
 
   
 0.787
SHK11960.1
Phage major capsid protein, HK97 family.
 
     0.781
SHJ64814.1
Phage major capsid protein, HK97 family.
 
     0.777
SHJ64388.1
5-methylcytosine-specific restriction enzyme A.
 
  
 0.741
SHJ36892.1
5-methylcytosine-specific restriction enzyme A.
 
  
 0.708
SHJ64781.1
ATP-dependent Clp protease, protease subunit; Belongs to the peptidase S14 family.
 
     0.659
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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