STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ73693.1NlpC/P60 family protein. (938 aa)    
Predicted Functional Partners:
SHJ73639.1
Protein of unknown function.
 
     0.955
SHJ73582.1
LPXTG-motif cell wall anchor domain-containing protein.
 
   
 0.900
SHJ73519.1
Hypothetical protein.
 
     0.873
SHJ73610.1
DNA topoisomerase-3.
 
    0.856
SHJ73429.1
Protein of unknown function.
 
     0.838
SHJ89077.1
BlaI family transcriptional regulator, penicillinase repressor.
    
  0.813
SHK53345.1
Protein of unknown function.
 
     0.813
SHK68146.1
Bla regulator protein blaR1.
    
  0.809
SHK53500.1
Hypothetical protein.
 
     0.801
SHK79053.1
Protein of unknown function.
 
     0.787
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.