STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ83004.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
SHJ83026.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
 
 0.999
SHJ98298.1
Nitrogen fixation protein NifU.
  
  
 0.908
SHK35588.1
Cysteine desulfurase family protein.
  
 
 0.870
SHK67456.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
  
 
 0.817
SHJ25198.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.790
SHJ82974.1
PTS HPr component phosphorylation site.
       0.740
SHJ82949.1
Transcriptional regulator, LacI family.
   
   0.645
SHJ78622.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.431
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.