STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK46286.1Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-). (288 aa)    
Predicted Functional Partners:
SHK46308.1
lactose/L-arabinose transport system permease protein.
 0.998
SHK46253.1
lactose/L-arabinose transport system substrate-binding protein.
 
 0.966
SHJ95972.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.962
SHK62549.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 0.961
SHK62612.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 0.950
SHK00485.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
 0.946
SHJ45094.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 0.943
SHK00435.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.941
SHK97885.1
Multiple sugar transport system permease protein.
 0.937
SHJ55545.1
Multiple sugar transport system permease protein.
 0.936
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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