STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK66008.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
SHK65980.1
ABC-type multidrug transport system, ATPase and permease component.
       0.806
SHK65955.1
Uncharacterised nucleotidyltransferase.
       0.792
SHJ31001.1
Signal peptidase, endoplasmic reticulum-type.
   
 
  0.787
SHJ63605.1
Signal peptidase, endoplasmic reticulum-type.
   
 
  0.787
SHK66035.1
Coenzyme PQQ synthesis protein D (PqqD).
       0.786
SHK66066.1
Hypothetical protein.
       0.774
SHK66092.1
Leucine rich repeat-containing protein.
       0.773
SHJ54124.1
Hypothetical protein.
   
 0.454
SHK66120.1
Hypothetical protein.
       0.423
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.420
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.