STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK73922.1ABC-2 type transport system permease protein. (288 aa)    
Predicted Functional Partners:
SHK73889.1
ABC-2 type transport system permease protein.
  
 0.995
SHK73948.1
ABC-2 type transport system ATP-binding protein.
 
 0.990
SHK26864.1
Hypothetical protein.
  
 
 0.945
SHK73861.1
Protein of unknown function.
 
     0.929
SHK17383.1
ABC-2 type transport system ATP-binding protein.
 
 0.870
SHJ89146.1
ABC-2 type transport system ATP-binding protein.
 
 0.860
SHK17207.1
ABC-2 type transport system ATP-binding protein.
 
 0.845
SHK59638.1
ABC-2 type transport system ATP-binding protein.
  
 0.830
SHJ49906.1
ABC-2 type transport system ATP-binding protein.
  
 0.829
SHK62466.1
ABC-2 type transport system ATP-binding protein.
  
 0.829
Your Current Organism:
Hespellia stercorisuis
NCBI taxonomy Id: 1121950
Other names: H. stercorisuis DSM 15480, Hespellia stercorisuis DSM 15480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.