STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421825_00046Unannotated protein. (466 aa)    
Predicted Functional Partners:
GCA_000421825_00045
Unannotated protein.
 
 0.999
GCA_000421825_00351
Unannotated protein.
  
 0.936
GCA_000421825_00350
Unannotated protein.
     
 0.828
GCA_000421825_00347
Unannotated protein.
 
  
 0.825
GCA_000421825_00044
Unannotated protein.
  
  
 0.760
GCA_000421825_00899
Unannotated protein.
     
 0.751
GCA_000421825_00342
Unannotated protein.
  
  
 0.719
GCA_000421825_00047
Unannotated protein.
 
    0.715
GCA_000421825_02288
Unannotated protein.
 
  
 0.710
GCA_000421825_02880
Unannotated protein.
  
  
 0.709
Your Current Organism:
Humibacter albus
NCBI taxonomy Id: 1121952
Other names: H. albus DSM 18994, Humibacter albus DSM 18994, Humibacter albus SC-083
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