STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421825_01202Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_000421825_01203
Unannotated protein.
 
    
0.841
GCA_000421825_02348
Unannotated protein.
  
  
  0.791
GCA_000421825_02212
Unannotated protein.
 
 
  0.712
GCA_000421825_01872
Unannotated protein.
  
 
  0.695
GCA_000421825_03084
Unannotated protein.
  
     0.695
GCA_000421825_02211
Unannotated protein.
  
  
 
0.660
GCA_000421825_02756
Unannotated protein.
 
 
  0.651
GCA_000421825_03160
Unannotated protein.
  
     0.636
GCA_000421825_01199
Unannotated protein.
       0.631
GCA_000421825_01200
Unannotated protein.
       0.631
Your Current Organism:
Humibacter albus
NCBI taxonomy Id: 1121952
Other names: H. albus DSM 18994, Humibacter albus DSM 18994, Humibacter albus SC-083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.