STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421825_01791Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_000421825_00729
Unannotated protein.
 
    0.822
GCA_000421825_01120
Unannotated protein.
   
    0.741
GCA_000421825_01790
Unannotated protein.
    
  0.666
GCA_000421825_01789
Unannotated protein.
       0.662
GCA_000421825_01788
Unannotated protein.
       0.631
GCA_000421825_01895
Unannotated protein.
  
    0.567
GCA_000421825_02779
Unannotated protein.
  
     0.513
GCA_000421825_02710
Unannotated protein.
 
    0.478
GCA_000421825_01608
Unannotated protein.
 
    0.471
GCA_000421825_02659
Unannotated protein.
  
     0.454
Your Current Organism:
Humibacter albus
NCBI taxonomy Id: 1121952
Other names: H. albus DSM 18994, Humibacter albus DSM 18994, Humibacter albus SC-083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.