STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK08338.1Protein of unknown function. (746 aa)    
Predicted Functional Partners:
SHK08295.1
N-terminal double-transmembrane domain-containing protein.
 
     0.952
SHK08381.1
Hypothetical protein.
 
     0.952
SHK07841.1
Predicted Zn-dependent protease or its inactivated homolog.
 
     0.782
SHK07964.1
Predicted Zn-dependent protease or its inactivated homolog.
 
     0.782
SHK08084.1
Protein of unknown function.
 
     0.782
SHK07814.1
TldD protein.
 
     0.779
SHK07883.1
TldD protein.
 
     0.779
SHK07924.1
TldD protein.
 
     0.779
SHK08162.1
Protein of unknown function DUF58.
 
     0.482
Your Current Organism:
Hymenobacter psychrotolerans
NCBI taxonomy Id: 1121959
Other names: H. psychrotolerans DSM 18569, Hymenobacter psychrotolerans DSM 18569, Hymenobacter psychrotolerans Tibet-IIU11, Hymenobacter sp. Tibet-IIU11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.