Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK08738.1 | SHL43513.1 | SAMN02746009_00274 | SAMN02746009_02760 | Alpha,alpha-trehalase. | Fucose permease. | 0.414 |
SHK59333.1 | SHL43513.1 | SAMN02746009_01194 | SAMN02746009_02760 | Lysophospholipase, alpha-beta hydrolase superfamily. | Fucose permease. | 0.457 |
SHL43462.1 | SHL43513.1 | SAMN02746009_02759 | SAMN02746009_02760 | Putative auto-transporter adhesin, head GIN domain. | Fucose permease. | 0.675 |
SHL43513.1 | SHK08738.1 | SAMN02746009_02760 | SAMN02746009_00274 | Fucose permease. | Alpha,alpha-trehalase. | 0.414 |
SHL43513.1 | SHK59333.1 | SAMN02746009_02760 | SAMN02746009_01194 | Fucose permease. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.457 |
SHL43513.1 | SHL43462.1 | SAMN02746009_02760 | SAMN02746009_02759 | Fucose permease. | Putative auto-transporter adhesin, head GIN domain. | 0.675 |
SHL43513.1 | SHL43555.1 | SAMN02746009_02760 | SAMN02746009_02761 | Fucose permease. | Hypothetical protein. | 0.413 |
SHL43555.1 | SHL43513.1 | SAMN02746009_02761 | SAMN02746009_02760 | Hypothetical protein. | Fucose permease. | 0.413 |