STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL58407.1VanZ like family protein. (128 aa)    
Predicted Functional Partners:
SHL58378.1
Peptidase family M28.
      0.776
SHK37234.1
Hypothetical protein.
  
     0.719
SHK05784.1
Hypothetical protein.
  
     0.716
SHK05755.1
Hypothetical protein.
  
    0.687
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.682
SHL19549.1
Hypothetical protein.
  
     0.678
SHK57169.1
Hypothetical protein.
  
     0.656
SHL65209.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.655
SHL56356.1
Hypothetical protein.
  
     0.653
SHM24976.1
Hypothetical protein.
  
     0.652
Your Current Organism:
Hymenobacter psychrotolerans
NCBI taxonomy Id: 1121959
Other names: H. psychrotolerans DSM 18569, Hymenobacter psychrotolerans DSM 18569, Hymenobacter psychrotolerans Tibet-IIU11, Hymenobacter sp. Tibet-IIU11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.