STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_08780Unannotated protein. (116 aa)    
Predicted Functional Partners:
BWR60_10175
Unannotated protein; Belongs to the sigma-70 factor family.
 
     0.776
BWR60_05970
Unannotated protein; Belongs to the sigma-70 factor family.
 
     0.776
BWR60_11605
Unannotated protein; Belongs to the sigma-70 factor family.
 
     0.776
BWR60_10170
Unannotated protein.
  
     0.772
BWR60_35140
Unannotated protein.
  
     0.758
GCA_000423185_01436
Unannotated protein.
       0.594
GCA_000423185_01438
Unannotated protein.
       0.524
GCA_000423185_01435
Unannotated protein.
       0.457
cobT
Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
       0.439
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.