STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423185_01743Unannotated protein. (232 aa)    
Predicted Functional Partners:
GCA_000423185_04833
Unannotated protein.
  
  
 0.880
BWR60_13915
Unannotated protein.
 
    0.797
GCA_000423185_02330
Unannotated protein.
    
   0.776
GCA_000423185_00718
Unannotated protein.
 
 
 0.731
GCA_000423185_00772
Unannotated protein.
 
 
 0.725
GCA_000423185_05088
Unannotated protein.
 
 
 0.722
GCA_000423185_03017
Unannotated protein.
  
 
 0.639
ku-2
Unannotated protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
     0.621
BWR60_18135
Unannotated protein.
   
    0.604
BWR60_04870
Unannotated protein.
   
    0.604
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.