STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423185_01947Unannotated protein. (263 aa)    
Predicted Functional Partners:
BWR60_07840
Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.977
BWR60_04255
Unannotated protein.
 
 
  0.973
BWR60_07845
Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.971
GCA_000423185_01948
Unannotated protein.
 
 
0.968
GCA_000423185_04444
Unannotated protein.
 
 
  0.963
BWR60_07830
Unannotated protein.
 
 
  0.957
GCA_000423185_01950
Unannotated protein.
 
 
  0.955
GCA_000423185_01949
Unannotated protein.
 
 
  0.929
BWR60_29955
Unannotated protein.
 
 
 
0.922
GCA_000423185_06660
Unannotated protein.
 
 
  0.910
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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