STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_25680Unannotated protein; Belongs to the ABC transporter superfamily. (580 aa)    
Predicted Functional Partners:
BWR60_25675
Unannotated protein.
 
  0.829
BWR60_25685
Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.773
BWR60_25670
Unannotated protein.
  
 
  0.764
GCA_000423185_06684
Unannotated protein.
  
 0.719
GCA_000423185_01968
Unannotated protein.
 
 
 
0.658
BWR60_25665
Unannotated protein.
  
 
  0.586
GCA_000423185_03489
Unannotated protein.
 
 
  0.550
BWR60_25470
Unannotated protein.
  
  0.475
BWR60_07470
Unannotated protein.
 
 
  0.437
BWR60_12910
Unannotated protein.
 
 
  0.432
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.