STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_02615Unannotated protein. (95 aa)    
Predicted Functional Partners:
BWR60_26465
Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
 0.974
BWR60_03585
Unannotated protein.
  
 0.969
mfd
Unannotated protein; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.850
BWR60_24600
Unannotated protein.
     
 0.751
BWR60_26470
Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
 0.741
BWR60_26455
Unannotated protein.
 
  
 0.712
BWR60_02620
Unannotated protein.
       0.710
BWR60_31025
Unannotated protein.
    
  0.601
BWR60_06085
Unannotated protein.
    
  0.601
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.547
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.