STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_25360Unannotated protein. (240 aa)    
Predicted Functional Partners:
BWR60_25370
Unannotated protein.
 
     0.860
BWR60_11685
Unannotated protein.
 
 0.816
BWR60_12420
Unannotated protein.
     
 0.804
ubiA
Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
   0.784
BWR60_11795
Unannotated protein.
  
 
  0.777
BWR60_25365
Unannotated protein.
  
    0.777
GCA_000423185_00334
Unannotated protein.
  
 0.760
BWR60_25355
Unannotated protein.
  
    0.719
GCA_000423185_03057
Unannotated protein.
  
 0.629
BWR60_34695
Unannotated protein.
  
 0.619
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.