STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_20905Unannotated protein; Belongs to the ABC transporter superfamily. (340 aa)    
Predicted Functional Partners:
BWR60_20895
Unannotated protein.
 
  0.934
BWR60_20890
Unannotated protein.
 
  0.907
BWR60_18485
Unannotated protein.
 
  0.861
oppD
Unannotated protein; Belongs to the ABC transporter superfamily.
 
  
 
0.849
oppB
Unannotated protein.
 
  0.811
BWR60_20885
Unannotated protein.
 
 
  0.789
BWR60_20910
Unannotated protein.
       0.773
BWR60_24805
Unannotated protein.
  
 
  0.761
BWR60_18495
Unannotated protein.
 
 
  0.757
BWR60_18500
Unannotated protein.
  
 
  0.751
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.