STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423185_05185Unannotated protein. (270 aa)    
Predicted Functional Partners:
BWR60_11685
Unannotated protein.
    
 0.771
GCA_000423185_00334
Unannotated protein.
    
 0.751
BWR60_34695
Unannotated protein.
    
 0.721
bioD
Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 
 0.615
GCA_000423185_05183
Unannotated protein.
       0.584
GCA_000423185_05184
Unannotated protein.
       0.584
BWR60_31495
Unannotated protein.
    
  0.568
GCA_000423185_05182
Unannotated protein.
       0.530
BWR60_29635
Unannotated protein.
    
 0.516
GCA_000423185_03057
Unannotated protein.
    
 0.499
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.