STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWR60_31275Unannotated protein. (373 aa)    
Predicted Functional Partners:
BWR60_17905
Unannotated protein; Belongs to the GcvT family.
  
 0.961
BWR60_18130
Unannotated protein; Belongs to the GcvT family.
  
 0.961
BWR60_12420
Unannotated protein.
    
 0.836
pyrF
Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
       0.788
trpF
Unannotated protein; Belongs to the TrpF family.
       0.783
BWR60_17900
Unannotated protein.
  
 0.669
BWR60_17910
Unannotated protein.
  
  0.648
BWR60_31260
Unannotated protein.
 
 
 0.647
BWR60_08380
Unannotated protein; Belongs to the GcvT family.
   
  0.645
BWR60_10630
Unannotated protein.
   
 
 0.591
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.