STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423185_06669Unannotated protein. (412 aa)    
Predicted Functional Partners:
BWR60_01950
Unannotated protein.
 
 
  0.867
GCA_000423185_06661
Unannotated protein.
 
 
  0.863
BWR60_01945
Unannotated protein.
 
 
  0.855
GCA_000423185_06667
Unannotated protein.
 
     0.819
BWR60_01935
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 
  0.801
GCA_000423185_06660
Unannotated protein.
 
 
  0.739
GCA_000423185_06256
Unannotated protein.
 
     0.721
GCA_000423185_06666
Unannotated protein.
 
     0.674
GCA_000423185_06668
Unannotated protein.
      0.588
GCA_000423185_06665
Unannotated protein.
  
 
  0.527
Your Current Organism:
Inquilinus limosus
NCBI taxonomy Id: 1122125
Other names: I. limosus DSM 16000, Inquilinus limosus DSM 16000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.