STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380505_01031Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000380505_01032
Unannotated protein.
 
     0.828
GCA_000380505_03450
Unannotated protein.
  
     0.650
GCA_000380505_00556
Unannotated protein.
  
     0.612
GCA_000380505_01029
Unannotated protein.
       0.551
GCA_000380505_01030
Unannotated protein.
       0.551
GCA_000380505_03192
Unannotated protein.
  
     0.537
GCA_000380505_00278
Unannotated protein.
  
     0.534
GCA_000380505_01995
Unannotated protein.
  
     0.512
GCA_000380505_02312
Unannotated protein.
  
     0.443
GCA_000380505_01563
Unannotated protein.
  
     0.435
Your Current Organism:
Kaistia granuli
NCBI taxonomy Id: 1122132
Other names: K. granuli DSM 23481, Kaistia granuli DSM 23481, Kaistia granuli Ko04
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.