STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380505_01531Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_000380505_00831
Unannotated protein.
  
 
 0.808
GCA_000380505_02320
Unannotated protein.
 
 
 0.796
GCA_000380505_01530
Unannotated protein.
 
     0.727
GCA_000380505_03393
Unannotated protein.
  
     0.683
GCA_000380505_00830
Unannotated protein.
  
     0.578
GCA_000380505_01532
Unannotated protein.
  
    0.541
GCA_000380505_03226
Unannotated protein.
 
   
 0.506
GCA_000380505_01243
Unannotated protein.
  
     0.501
GCA_000380505_01526
Unannotated protein.
 
    0.487
GCA_000380505_01529
Unannotated protein.
 
     0.480
Your Current Organism:
Kaistia granuli
NCBI taxonomy Id: 1122132
Other names: K. granuli DSM 23481, Kaistia granuli DSM 23481, Kaistia granuli Ko04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.