STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380505_02437Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_000380505_00253
Unannotated protein.
  
 0.857
GCA_000380505_00429
Unannotated protein.
  
  
  0.767
GCA_000380505_03750
Unannotated protein.
  
  
  0.736
GCA_000380505_03782
Unannotated protein.
  
  
  0.719
GCA_000380505_00774
Unannotated protein.
   
 
  0.683
GCA_000380505_01861
Unannotated protein.
    
 0.674
GCA_000380505_00207
Unannotated protein.
   
 
 0.667
GCA_000380505_00900
Unannotated protein.
   
 
 0.667
GCA_000380505_01227
Unannotated protein.
  
 
  0.666
GCA_000380505_03600
Unannotated protein.
  
 
  0.666
Your Current Organism:
Kaistia granuli
NCBI taxonomy Id: 1122132
Other names: K. granuli DSM 23481, Kaistia granuli DSM 23481, Kaistia granuli Ko04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.