STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380505_03538Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000380505_03535
Unannotated protein.
 
 0.995
GCA_000380505_03539
Unannotated protein.
       0.773
GCA_000380505_00956
Unannotated protein.
  
 0.743
GCA_000380505_00382
Unannotated protein.
    
 0.714
GCA_000380505_03818
Unannotated protein.
    
 0.681
GCA_000380505_02421
Unannotated protein.
  
  
0.679
GCA_000380505_01227
Unannotated protein.
    
  0.676
GCA_000380505_03600
Unannotated protein.
    
  0.676
GCA_000380505_00463
Unannotated protein.
   
 
 0.671
GCA_000380505_03155
Unannotated protein.
   
 
  0.657
Your Current Organism:
Kaistia granuli
NCBI taxonomy Id: 1122132
Other names: K. granuli DSM 23481, Kaistia granuli DSM 23481, Kaistia granuli Ko04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.