STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE98163.12-keto-3-deoxy-phosphogalactonate aldolase. (207 aa)    
Predicted Functional Partners:
SHE98115.1
2-dehydro-3-deoxygalactonokinase.
 
  
 0.989
glk
Glucokinase; Belongs to the bacterial glucokinase family.
 
 
 0.811
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.801
SHF12730.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.801
SHF89549.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.770
SHG72911.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.730
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.727
zwf-2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.727
SHG60025.1
D-lactate dehydrogenase.
   
 
 0.726
SHG39175.1
2-keto-3-deoxy-phosphogluconate aldolase.
  
  
 
0.724
Your Current Organism:
Kaistia soli
NCBI taxonomy Id: 1122133
Other names: K. soli DSM 19436, Kaistia soli 5YN9-8, Kaistia soli DSM 19436, Kaistia soli NBRC 106436
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