STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX94546.1Glutamate synthase (ferredoxin). (1517 aa)    
Predicted Functional Partners:
SDX94514.1
Glutamate synthase (NADPH/NADH) small chain.
 0.999
SDX94673.1
Glutamate synthase (NADPH/NADH) small chain.
 
 0.999
SDY10394.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.993
SDY39904.1
Glutamine synthetase.
  
 
 0.960
SDY15556.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.959
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.958
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.954
SDX88373.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.943
SDY20780.1
Glutamine synthetase.
  
 
 0.941
SDY07557.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
   
 0.940
Your Current Organism:
Lachnobacterium bovis
NCBI taxonomy Id: 1122142
Other names: L. bovis DSM 14045, Lachnobacterium bovis DSM 14045
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.