STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY25131.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (484 aa)    
Predicted Functional Partners:
SDY19392.1
Glycosyltransferase, GT2 family.
  
 
 0.861
SDX85808.1
Cellulose synthase (UDP-forming).
  
 
 0.789
SDY19970.1
Glycosyl transferase family 2.
  
 
 0.789
SDY25099.1
Hypothetical protein.
       0.578
SDX87228.1
Zinc-ribbon domain-containing protein.
    
 0.546
SDX85977.1
Succinyl-diaminopimelate desuccinylase.
    
  0.515
SDY68097.1
Cellobiose phosphorylase.
     
 0.484
SDY70934.1
Hypothetical protein.
     
 0.470
pyrC-2
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
  0.464
SDY25161.1
cob(I)alamin adenosyltransferase.
       0.458
Your Current Organism:
Lachnobacterium bovis
NCBI taxonomy Id: 1122142
Other names: L. bovis DSM 14045, Lachnobacterium bovis DSM 14045
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.